STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCC1ATP binding cassette subfamily C member 1. (1512 aa)    
Predicted Functional Partners:
ABCG2
ATP binding cassette subfamily G member 2 (Junior blood group).
   
 0.680
KATNAL2
Katanin catalytic subunit A1 like 2.
  
 0.653
ENSAOWP00000008862
annotation not available
   
 0.642
SLC9A3R2
SLC9A3 regulator 2.
   
 0.615
SLC9A3R1
SLC9A3 regulator 1.
   
 0.615
RAPGEF4
Rap guanine nucleotide exchange factor 4.
    
 0.605
ENSAOWP00000027340
annotation not available
  
  0.601
ENSAOWP00000027343
annotation not available
  
  0.601
USP10
Ubiquitin specific peptidase 10.
    
  0.599
KCNJ2
Potassium inwardly rectifying channel subfamily J member 2.
    
 0.588
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.