STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000005116annotation not available (621 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
     
 0.929
TJP1
Tight junction protein 1.
    
 0.841
MARVELD2
MARVEL domain containing 2.
  
  
 
0.832
CDK9
Cyclin dependent kinase 9.
    
 0.825
EAF2
ELL associated factor 2.
    
 0.793
EAF1
ELL associated factor 1.
    
 0.793
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
    
 0.756
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.756
POLR2E
RNA polymerase II subunit E.
    
  0.739
ENSAOWP00000023940
annotation not available
    
  0.739
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.