STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000005142annotation not available (331 aa)    
Predicted Functional Partners:
BABAM2
BRISC and BRCA1 A complex member 2.
    
 0.998
BRCC3
BRCA1/BRCA2-containing complex subunit 3.
    
 0.997
UIMC1
Ubiquitin interaction motif containing 1.
    
 0.996
BRCA1
BRCA1 DNA repair associated.
    
 0.995
BARD1
BRCA1 associated RING domain 1.
    
 0.993
ABRAXAS2
Abraxas 2, BRISC complex subunit.
    
 0.993
ENSAOWP00000003516
annotation not available
    
 0.961
ENSAOWP00000006482
annotation not available
    
 0.961
SHMT2
Serine hydroxymethyltransferase 2.
    
  0.923
SHMT1
Serine hydroxymethyltransferase 1.
    
  0.923
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.