STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA6GATA binding protein 6. (390 aa)    
Predicted Functional Partners:
SRF
Serum response factor.
    
 0.861
NKX2-5
NK2 homeobox 5.
   
 0.856
ZFPM2
Zinc finger protein, FOG family member 2.
    
 0.854
ARID4A
AT-rich interaction domain 4A.
   
 0.816
ARID4B
AT-rich interaction domain 4B.
   
 0.816
LMO2
LIM domain only 2.
    
 0.812
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
   
 0.800
LMCD1
LIM and cysteine rich domains 1.
    
 0.769
NFATC1
Nuclear factor of activated T cells 1.
    
 0.757
NFATC2
Nuclear factor of activated T cells 2.
    
 0.753
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.