STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2orf49Chromosome 2 open reading frame 49. (244 aa)    
Predicted Functional Partners:
RTCB
RNA 2',3'-cyclic phosphate and 5'-OH ligase.
    
 0.966
FAM98B
Family with sequence similarity 98 member B.
    
 0.964
RTRAF
RNA transcription, translation and transport factor.
    
 0.955
DDX1
DEAD-box helicase 1.
    
 0.951
FAM98A
Family with sequence similarity 98 member A.
     
 0.881
ZBTB8OS
Zinc finger and BTB domain containing 8 opposite strand.
     
 0.794
MAGOH
Mago homolog, exon junction complex subunit.
    
 0.616
RBM8A
RNA binding motif protein 8A.
    
 0.616
MRPS10
Mitochondrial ribosomal protein S10.
    
 0.603
MRPS11
Mitochondrial ribosomal protein S11.
    
 0.601
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.