STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VASH1Vasohibin 1. (275 aa)    
Predicted Functional Partners:
SVBP
Small vasohibin binding protein.
    
 0.980
RXYLT1
Ribitol xylosyltransferase 1.
     
 0.570
NDRG1
N-myc downstream regulated 1.
      
 0.495
ANGEL1
Angel homolog 1.
      
 0.422
ENSAOWP00000016749
annotation not available
      
 0.422
MAP2K5
Mitogen-activated protein kinase kinase 5.
      
 0.422
ENSAOWP00000011678
annotation not available
    
  0.412
ENSAOWP00000011683
annotation not available
    
  0.412
ENSAOWP00000014358
annotation not available
    
  0.412
ENSAOWP00000014360
annotation not available
    
  0.412
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.