STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000005385annotation not available (67 aa)    
Predicted Functional Partners:
DHX15
DEAH-box helicase 15.
    
 0.939
RBM17
RNA binding motif protein 17.
   
 
 0.920
RBM5
RNA binding motif protein 5.
   
 0.784
RBM6
RNA binding motif protein 6.
   
 0.784
DHX9
DExH-box helicase 9.
    
  0.733
SF1
Splicing factor 1.
   
 0.705
RBM25
RNA binding motif protein 25.
   
 
 0.673
DQX1
DEAQ-box RNA dependent ATPase 1.
    
 0.652
ENSAOWP00000027763
annotation not available
    
 0.652
ENSAOWP00000027764
annotation not available
    
 0.652
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.