STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000005604annotation not available (106 aa)    
Predicted Functional Partners:
SLC25A1
Solute carrier family 25 member 1.
    
   0.847
DRG1
Developmentally regulated GTP binding protein 1.
    
   0.847
CS
Citrate synthase.
    
   0.847
LSM3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 
  0.792
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 
  0.779
RPP38
Ribonuclease P/MRP subunit p38.
   
 
  0.757
SNU13
Small nuclear ribonucleoprotein 13.
   
 
  0.745
DKC1
Dyskerin pseudouridine synthase 1.
   
 
  0.733
TRUB1
TruB pseudouridine synthase family member 1.
   
 
  0.733
ENSAOWP00000004410
annotation not available
    
   0.728
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.