STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEPHS1Selenophosphate synthetase 1. (392 aa)    
Predicted Functional Partners:
SCLY
Selenocysteine lyase.
   
 0.904
ENSAOWP00000021972
annotation not available
   
 0.862
SEPSECS
Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase.
     
 0.853
MOCOS
Molybdenum cofactor sulfurase.
    
 0.831
TXNRD2
Thioredoxin reductase 2.
  
 
 0.796
ENSAOWP00000007903
annotation not available
    
 0.769
TXNRD1
Thioredoxin reductase 1.
  
 
 0.719
TXNRD3
Thioredoxin reductase 3.
  
 
 0.719
GLRX2
Glutaredoxin 2.
    
 0.711
GLRX
Glutaredoxin.
    
 0.696
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.