STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35F6Solute carrier family 35 member F6. (925 aa)    
Predicted Functional Partners:
NUS1
NUS1 dehydrodolichyl diphosphate synthase subunit.
    
 0.642
FAF2
Fas associated factor family member 2.
   
  
 0.532
XPNPEP3
X-prolyl aminopeptidase 3.
    
 0.532
XPNPEP2
X-prolyl aminopeptidase 2.
    
 0.532
PEPD
Peptidase D.
    
 0.532
XPNPEP1
X-prolyl aminopeptidase 1.
    
 0.532
FASTKD3
FAST kinase domains 3.
    
 0.532
SLC35B2
Solute carrier family 35 member B2.
      
 0.518
SLC35D1
Solute carrier family 35 member D1.
   
  
 0.518
SLC35B4
Solute carrier family 35 member B4.
      
 0.509
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.