STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000006772annotation not available (587 aa)    
Predicted Functional Partners:
IFIH1
Interferon induced with helicase C domain 1.
    
 0.939
TRAF6
TNF receptor associated factor 6.
    
 0.934
TRAF3
TNF receptor associated factor 3.
    
 0.934
NLRX1
NLR family member X1.
     
 0.911
STING1
Stimulator of interferon response cGAMP interactor 1.
    
 0.911
DHX33
DEAH-box helicase 33.
    
 0.905
ATG5
Autophagy related 5.
    
 0.902
DHX58
DExH-box helicase 58.
    
 0.896
ATG12
Autophagy related 12.
    
 0.893
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.889
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.