STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSPHPhosphoserine phosphatase. (253 aa)    
Predicted Functional Partners:
PSAT1
Phosphoserine aminotransferase 1.
  
 
 0.962
BCAT1
Branched chain amino acid transaminase 1.
    
 0.941
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
   
 0.937
CTH
Cystathionine gamma-lyase.
  
 
 0.933
CSTF3
Cleavage stimulation factor subunit 3.
  
 
 0.917
SHMT2
Serine hydroxymethyltransferase 2.
  
 0.916
SHMT1
Serine hydroxymethyltransferase 1.
  
 0.916
THNSL1
Threonine synthase like 1.
  
 0.905
THNSL2
Threonine synthase like 2.
  
 0.905
PHGDH
Phosphoglycerate dehydrogenase.
  
 0.899
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.