STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H15Zinc finger CCCH-type containing 15. (455 aa)    
Predicted Functional Partners:
DRG1
Developmentally regulated GTP binding protein 1.
   
 
 0.995
DRG2
Developmentally regulated GTP binding protein 2.
   
 
 0.965
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
    
   0.915
RPL23A
Ribosomal protein L23a.
   
   0.838
RPS15
Ribosomal protein S15.
   
   0.838
RPS12
Ribosomal protein S12.
   
   0.835
ENSAOWP00000005894
annotation not available
   
   0.827
RPL5
Ribosomal protein L5.
   
   0.817
SSB
Small RNA binding exonuclease protection factor La.
   
    0.809
RPS20
Ribosomal protein S20.
   
   0.804
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.