STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REREArginine-glutamic acid dipeptide repeats. (1556 aa)    
Predicted Functional Partners:
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
  0.847
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
  0.847
FAT2
FAT atypical cadherin 2.
    
 0.795
FAT1
FAT atypical cadherin 1.
    
 0.795
NR2E1
Nuclear receptor subfamily 2 group E member 1.
    
 0.793
FAT3
FAT atypical cadherin 3.
    
 0.728
NR2E3
Nuclear receptor subfamily 2 group E member 3.
    
 0.667
EP300
E1A binding protein p300.
   
 0.664
C5orf22
Chromosome 5 open reading frame 22.
    
 0.652
CREBBP
CREB binding protein.
   
 0.635
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.