STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLFM1Olfactomedin 1. (485 aa)    
Predicted Functional Partners:
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
   
 0.787
CACNG3
Calcium voltage-gated channel auxiliary subunit gamma 3.
   
  0.770
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
   
 0.724
ABHD6
Abhydrolase domain containing 6.
     
 0.690
GRIN2B
Glutamate ionotropic receptor NMDA type subunit 2B.
   
 
  0.682
GRIN2A
Glutamate ionotropic receptor NMDA type subunit 2A.
   
 
  0.679
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
   
 
  0.646
HTR3A
5-hydroxytryptamine receptor 3A.
   
 
  0.642
ENSAOWP00000019454
annotation not available
    
  0.586
ENSAOWP00000010617
annotation not available
   
  0.581
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.