STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD40CD40 molecule. (280 aa)    
Predicted Functional Partners:
TRAF3
TNF receptor associated factor 3.
   
 0.996
CD40LG
CD40 ligand.
    
 0.992
TRAF6
TNF receptor associated factor 6.
    
 0.991
TRAF5
TNF receptor associated factor 5.
   
 0.972
TRAF2
TNF receptor associated factor 2.
   
 0.952
TRAF1
TNF receptor associated factor 1.
   
 0.952
TNFSF11
TNF superfamily member 11.
    
 0.892
TNFSF15
TNF superfamily member 15.
   
 0.825
ENSAOWP00000012324
annotation not available
   
 0.815
BTLA
B and T lymphocyte associated.
   
 0.789
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.