STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPS6HPS6 biogenesis of lysosomal organelles complex 2 subunit 3. (799 aa)    
Predicted Functional Partners:
HPS3
HPS3 biogenesis of lysosomal organelles complex 2 subunit 1.
   
 0.943
HPS5
HPS5 biogenesis of lysosomal organelles complex 2 subunit 2.
    
 0.940
HPS4
HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.
     
 0.901
BLOC1S6
Biogenesis of lysosomal organelles complex 1 subunit 6.
     
 0.888
BLOC1S4
Biogenesis of lysosomal organelles complex 1 subunit 4.
     
 0.885
TECPR2
Tectonin beta-propeller repeat containing 2.
    
 0.884
HPS1
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.
     
 0.874
ENSAOWP00000008318
annotation not available
     
 0.849
DTNBP1
Dystrobrevin binding protein 1.
     
 0.846
BLOC1S2
Biogenesis of lysosomal organelles complex 1 subunit 2.
     
 0.824
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.