STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPSEHeparanase. (528 aa)    
Predicted Functional Partners:
ENSAOWP00000025786
annotation not available
     
 0.871
HPSE2
Heparanase 2 (inactive).
  
  
 
0.830
ENSAOWP00000028314
annotation not available
     
 0.825
SDC2
Syndecan 2.
     
 0.612
HGS
Hepatocyte growth factor-regulated tyrosine kinase substrate.
      
 0.599
SDC3
Syndecan 3.
     
 0.597
SDC4
Syndecan 4.
     
 0.571
AGRN
Agrin.
     
 0.560
SULF2
Sulfatase 2.
     
 0.522
SULF1
Sulfatase 1.
     
 0.500
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.