STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LONRF1LON peptidase N-terminal domain and ring finger 1. (555 aa)    
Predicted Functional Partners:
ENSAOWP00000019049
annotation not available
   
  0.766
ENSAOWP00000013676
annotation not available
    
 0.740
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.721
TP53BP1
Tumor protein p53 binding protein 1.
    
 0.666
ENSAOWP00000013956
annotation not available
    
 0.664
BARD1
BRCA1 associated RING domain 1.
    
 0.647
PAXIP1
PAX interacting protein 1.
   
 0.618
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.618
BRCA1
BRCA1 DNA repair associated.
    
 0.614
CUL1
Cullin 1.
   
 0.599
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.