STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNGTTRNA guanylyltransferase and 5'-phosphatase. (582 aa)    
Predicted Functional Partners:
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
    
 0.997
RNMT
RNA guanine-7 methyltransferase.
   
 0.992
POLR2A
RNA polymerase II subunit A.
    
 0.979
POLR2C
RNA polymerase II subunit C.
   
 0.858
NCOR1
Nuclear receptor corepressor 1.
    
 0.808
NCOR2
Nuclear receptor corepressor 2.
    
 0.808
POLR2D
RNA polymerase II subunit D.
    
  0.806
ENSAOWP00000000966
annotation not available
   
 
 0.779
ENSAOWP00000024282
annotation not available
   
 
 0.779
POLR2G
RNA polymerase II subunit G.
    
  0.771
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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