STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD6Ankyrin repeat domain 6. (793 aa)    
Predicted Functional Partners:
RELA
RELA proto-oncogene, NF-kB subunit.
   
 0.847
REL
REL proto-oncogene, NF-kB subunit.
   
 0.847
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.829
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.829
ENSAOWP00000020826
annotation not available
   
 0.771
MAP3K8
Mitogen-activated protein kinase kinase kinase 8.
   
 0.763
ENSAOWP00000008933
annotation not available
    
 0.755
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
 0.741
ENSAOWP00000005747
annotation not available
    
 0.740
CUL1
Cullin 1.
    
 0.740
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.