STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000008239annotation not available (170 aa)    
Predicted Functional Partners:
EHBP1
EH domain binding protein 1.
   
 
0.763
PDLIM3
PDZ and LIM domain 3.
     
 0.759
PDLIM1
PDZ and LIM domain 1.
     
 0.754
PDLIM5
PDZ and LIM domain 5.
   
 
 0.744
PDLIM7
PDZ and LIM domain 7.
   
 
 0.732
LDB3
LIM domain binding 3.
   
 
  0.717
ENSAOWP00000002853
annotation not available
  
  
0.645
MYO3B
Myosin IIIB.
     
 0.591
ENSAOWP00000010555
annotation not available
     
 0.591
ENSAOWP00000027357
annotation not available
     
 0.591
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.