STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC2A12Solute carrier family 2 member 12. (592 aa)    
Predicted Functional Partners:
MRPS15
Mitochondrial ribosomal protein S15.
   
  0.658
MRPS12
Mitochondrial ribosomal protein S12.
    
 0.656
MRPS7
Mitochondrial ribosomal protein S7.
    
  0.656
MRPL4
Mitochondrial ribosomal protein L4.
    
  0.652
MRPS5
Mitochondrial ribosomal protein S5.
    
  0.640
MRPS14
Mitochondrial ribosomal protein S14.
    
  0.640
RTCB
RNA 2',3'-cyclic phosphate and 5'-OH ligase.
    
 0.634
MRPL15
Mitochondrial ribosomal protein L15.
   
   0.626
MRPL36
Mitochondrial ribosomal protein L36.
   
   0.621
MRPL43
Mitochondrial ribosomal protein L43.
    
 
 0.620
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.