STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDNFBrain derived neurotrophic factor. (246 aa)    
Predicted Functional Partners:
NTRK2
Neurotrophic receptor tyrosine kinase 2.
   
 0.968
NTF3
Neurotrophin 3.
  
 
0.955
NTRK3
Neurotrophic receptor tyrosine kinase 3.
   
 0.953
NTRK1
Neurotrophic receptor tyrosine kinase 1.
   
 0.943
FGFR3
Fibroblast growth factor receptor 3.
     
 0.862
ENSAOWP00000012691
annotation not available
     
 0.862
ENSAOWP00000009698
annotation not available
     
 0.860
MST1R
Macrophage stimulating 1 receptor.
    
 0.858
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.858
ENSAOWP00000018930
annotation not available
    
 0.858
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.