STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIN7CLin-7 homolog C, crumbs cell polarity complex component. (207 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.999
MOCS3
Molybdenum cofactor synthesis 3.
    
 0.964
MPP1
Membrane palmitoylated protein 1.
    
 0.921
MPP6
Membrane palmitoylated protein 6.
    
 0.864
MPP2
Membrane palmitoylated protein 2.
    
 0.864
ENSAOWP00000007447
annotation not available
    
 0.850
ENSAOWP00000015235
annotation not available
    
 0.850
ENSAOWP00000017132
annotation not available
    
 0.850
MPP5
Membrane palmitoylated protein 5.
    
 0.807
APBA1
Amyloid beta precursor protein binding family A member 1.
    
 0.800
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.