STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDRD9Tudor domain containing 9. (781 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
  0.990
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.939
AP2M1
Adaptor related protein complex 2 subunit mu 1.
    
 0.857
ITSN1
Intersectin 1.
    
  0.845
ENSAOWP00000026465
annotation not available
    
  0.845
PIWIL2
Piwi like RNA-mediated gene silencing 2.
   
 0.833
ENSAOWP00000007510
annotation not available
   
 0.828
ENSAOWP00000022112
annotation not available
   
 0.784
UTP18
UTP18 small subunit processome component.
   
 0.759
DDX10
DEAD-box helicase 10.
  
 0.744
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.