STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF13PHD finger protein 13. (303 aa)    
Predicted Functional Partners:
MCRS1
Microspherule protein 1.
    
 0.871
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.825
ENSAOWP00000000600
annotation not available
    
 0.790
KANSL3
KAT8 regulatory NSL complex subunit 3.
    
 0.790
ENSAOWP00000022599
annotation not available
    
 0.775
TBL1XR1
Transducin beta like 1 X-linked receptor 1.
    
 0.775
ENSAOWP00000023018
annotation not available
    
 0.734
BRMS1L
BRMS1 like transcriptional repressor.
    
 0.731
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
    
 0.731
PRDM5
PR/SET domain 5.
    
 0.730
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.