STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP31Ubiquitin specific peptidase 31. (1211 aa)    
Predicted Functional Partners:
ENSAOWP00000013676
annotation not available
    
 0.762
USP10
Ubiquitin specific peptidase 10.
    
0.725
PCNA
Proliferating cell nuclear antigen.
   
  0.723
TRAF6
TNF receptor associated factor 6.
    
 0.716
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.709
ENSAOWP00000019049
annotation not available
    
 0.707
RNF123
Ring finger protein 123.
   
 0.660
MRPS9
Mitochondrial ribosomal protein S9.
   
 
 0.652
MRPS14
Mitochondrial ribosomal protein S14.
    
 0.641
MRPL3
Mitochondrial ribosomal protein L3.
   
 
 0.637
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.