STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFD1Ubiquitin recognition factor in ER associated degradation 1. (302 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
    
 0.999
VCP
Valosin containing protein.
    
 0.998
FAF1
Fas associated factor 1.
    
 0.995
DERL3
Derlin 3.
   
 0.995
DERL1
Derlin 1.
   
 0.994
FAF2
Fas associated factor family member 2.
    
 0.994
KATNAL2
Katanin catalytic subunit A1 like 2.
   
 0.992
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 0.990
FAAP100
FA core complex associated protein 100.
   
 0.986
PLAA
Phospholipase A2 activating protein.
   
 
 0.982
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.