STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD5Sterile alpha motif domain containing 5. (151 aa)    
Predicted Functional Partners:
SHC4
SHC adaptor protein 4.
    
 0.589
SHC3
SHC adaptor protein 3.
    
 0.589
SHC1
SHC adaptor protein 1.
    
 0.589
PIK3R1
Phosphoinositide-3-kinase regulatory subunit 1.
    
  0.554
ENSAOWP00000013609
annotation not available
    
  0.554
ENSAOWP00000020572
annotation not available
    
  0.554
SASH1
SAM and SH3 domain containing 1.
 
    
 0.513
GRAP2
GRB2 related adaptor protein 2.
   
  0.502
GRB2
Growth factor receptor bound protein 2.
   
  0.502
ENSAOWP00000023973
annotation not available
   
  0.502
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.