STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH13Cadherin 13. (715 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.878
JUP
Junction plakoglobin.
    
 0.859
ENSAOWP00000002075
annotation not available
     
0.787
CDH8
Cadherin 8.
     
0.785
CDH11
Cadherin 11.
     
0.784
CDH9
Cadherin 9.
     
0.782
ENSAOWP00000020613
annotation not available
     
 0.776
CDH22
Cadherin 22.
     
0.774
CDH7
Cadherin 7.
     
0.773
CDH17
Cadherin 17.
     
0.770
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.