STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIF1BYip1 interacting factor homolog B, membrane trafficking protein. (283 aa)    
Predicted Functional Partners:
ENSAOWP00000000443
annotation not available
   
 
 0.839
YIPF5
Yip1 domain family member 5.
   
 
 0.839
YIPF7
Yip1 domain family member 7.
   
 
 0.839
YIPF4
Yip1 domain family member 4.
   
 
 0.822
MAEA
Macrophage erythroblast attacher.
   
 
 0.817
RAB1A
RAB1A, member RAS oncogene family.
   
 
 0.739
ENSAOWP00000002933
annotation not available
    
 
 0.634
STX6
Syntaxin 6.
   
 
 0.583
RAB19
RAB19, member RAS oncogene family.
    
 
 0.515
REEP6
Receptor accessory protein 6.
    
 
 0.514
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.