STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUL1Cullin 1. (768 aa)    
Predicted Functional Partners:
SKP2
S-phase kinase associated protein 2.
    
 0.999
RBX1
Ring-box 1.
    
 0.999
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 0.998
UBXN7
UBX domain protein 7.
   
 0.995
FBXW11
F-box and WD repeat domain containing 11.
    
 0.990
UBE2M
Ubiquitin conjugating enzyme E2 M.
    
 0.986
FBXL17
F-box and leucine rich repeat protein 17.
    
 0.985
ENSAOWP00000007840
annotation not available
    
 0.984
COPS5
COP9 signalosome subunit 5.
   
 0.981
ARIH1
Ariadne RBR E3 ubiquitin protein ligase 1.
   
 0.980
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.