STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTSF1Gametocyte specific factor 1. (140 aa)    
Predicted Functional Partners:
ERI1
Exoribonuclease 1.
    
 
 0.666
ENSAOWP00000007510
annotation not available
   
 
 0.573
PIWIL2
Piwi like RNA-mediated gene silencing 2.
   
 
 0.556
ERI2
ERI1 exoribonuclease family member 2.
    
 
 0.555
HENMT1
HEN methyltransferase 1.
      
 0.519
ASZ1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
   
  
 0.487
DICER1
Dicer 1, ribonuclease III.
    
 
 0.483
ENSAOWP00000012837
annotation not available
      
 0.422
TDRD9
Tudor domain containing 9.
   
  
 0.411
NXT2
Nuclear transport factor 2 like export factor 2.
      
 0.410
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.