STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FMODFibromodulin. (380 aa)    
Predicted Functional Partners:
TGFB3
Transforming growth factor beta 3.
   
 0.870
TGFB2
Transforming growth factor beta 2.
    
 0.856
LUM
Lumican.
  
 
0.827
ENSAOWP00000024874
annotation not available
    
 0.823
ACAN
Aggrecan.
    
 0.808
ENSAOWP00000006636
annotation not available
    
  0.799
ADGRL3
Adhesion G protein-coupled receptor L3.
    
  0.799
ENSAOWP00000019283
annotation not available
    
  0.799
ADGRL2
Adhesion G protein-coupled receptor L2.
    
  0.799
ASPN
Asporin.
  
 
0.762
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.