STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFEMP1EGF containing fibulin extracellular matrix protein 1. (451 aa)    
Predicted Functional Partners:
ENSAOWP00000025466
annotation not available
 
  
  0.818
FKBP10
FKBP prolyl isomerase 10.
   
 0.691
ARID4A
AT-rich interaction domain 4A.
    
 0.675
ARID4B
AT-rich interaction domain 4B.
    
 0.675
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.653
MFAP5
Microfibril associated protein 5.
   
 
 0.643
MFAP2
Microfibril associated protein 2.
   
 
 0.631
ENSAOWP00000010819
annotation not available
    
  0.624
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.583
ENSAOWP00000008279
annotation not available
    
  0.577
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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