STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFXN1Sideroflexin 1. (322 aa)    
Predicted Functional Partners:
ENSAOWP00000021410
annotation not available
    
 0.672
ENSAOWP00000024500
annotation not available
    
 0.672
RAB25
RAB25, member RAS oncogene family.
    
 0.620
ENSAOWP00000007749
annotation not available
    
 0.586
CBFA2T3
CBFA2/RUNX1 partner transcriptional co-repressor 3.
   
    0.446
RUNX1T1
RUNX1 partner transcriptional co-repressor 1.
   
    0.446
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.