STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLF6Kruppel like factor 6. (290 aa)    
Predicted Functional Partners:
JUN
Jun proto-oncogene, AP-1 transcription factor subunit.
   
 0.727
SP1
Sp1 transcription factor.
    
0.715
BARD1
BRCA1 associated RING domain 1.
    
 0.647
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.567
SIN3B
SIN3 transcription regulator family member B.
    
 
 0.547
SIN3A
SIN3 transcription regulator family member A.
    
 
 0.547
ENSAOWP00000023167
annotation not available
    
 0.536
SUFU
SUFU negative regulator of hedgehog signaling.
    
 0.533
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.529
ENSAOWP00000027340
annotation not available
    
  0.529
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.