STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000021210annotation not available (88 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.797
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.782
ENSAOWP00000003055
annotation not available
   
 0.672
UBA5
Ubiquitin like modifier activating enzyme 5.
    
   0.661
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.650
CDC20B
Cell division cycle 20B.
   
 0.650
CDC20
Cell division cycle 20.
   
 0.650
EIF4A2
Eukaryotic translation initiation factor 4A2.
    
 0.641
ENSAOWP00000015076
annotation not available
   
 0.639
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.638
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.