STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB12Ankyrin repeat and SOCS box containing 12. (345 aa)    
Predicted Functional Partners:
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
    
 0.758
ENSAOWP00000023596
annotation not available
    
 0.728
COMMD8
COMM domain containing 8.
   
  0.716
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.709
ASB6
Ankyrin repeat and SOCS box containing 6.
  
  
 0.702
CUL5
Cullin 5.
    
 0.700
RNF7
Ring finger protein 7.
    
 0.691
COMMD1
Copper metabolism domain containing 1.
    
  0.683
ASB2
Ankyrin repeat and SOCS box containing 2.
  
 
0.683
COMMD4
COMM domain containing 4.
    
  0.666
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.