STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NID1Nidogen 1. (1187 aa)    
Predicted Functional Partners:
AGRN
Agrin.
   
 0.813
CYB5R4
Cytochrome b5 reductase 4.
    
 0.790
LAMA4
Laminin subunit alpha 4.
   
 0.769
EGFLAM
EGF like, fibronectin type III and laminin G domains.
   
 0.738
ENSAOWP00000008564
annotation not available
   
 0.728
ENSAOWP00000008572
annotation not available
   
 0.728
ENSAOWP00000025021
annotation not available
   
 0.728
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.657
LAMA2
Laminin subunit alpha 2.
   
 0.657
LAMC2
Laminin subunit gamma 2.
   
 0.655
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.