ENSAOWP00000022976 protein (Apteryx owenii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSAOWP00000022976

annotation not available (552 aa)

Predicted Functional Partners:

RHOA

0.721

ENSAOWP00000012117

0.721

RHOB

0.721

RND1

0.635

RND3

0.635

ENSAOWP00000015843

0.623

RHOF

0.623

CDC42

0.609

RAC1

0.568

RAC3

0.568

Your Current Organism:

Apteryx owenii

NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi

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structured XML interaction data, according to the 'PSI-MI' data standard

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... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ENSAOWP00000012117	ENSAOWP00000017554	ENSAOWP00000012117	Cell division cycle 42.	annotation not available	0.844
CDC42	ENSAOWP00000015843	ENSAOWP00000017554	ENSAOWP00000015843	Cell division cycle 42.	annotation not available	0.615
CDC42	ENSAOWP00000022976	ENSAOWP00000017554	ENSAOWP00000022976	Cell division cycle 42.	annotation not available	0.609
CDC42	RAC1	ENSAOWP00000017554	ENSAOWP00000001093	Cell division cycle 42.	Rac family small GTPase 1.	0.834
CDC42	RAC3	ENSAOWP00000017554	ENSAOWP00000004096	Cell division cycle 42.	Rac family small GTPase 3.	0.834
CDC42	RHOA	ENSAOWP00000017554	ENSAOWP00000007142	Cell division cycle 42.	Ras homolog family member A.	0.844
CDC42	RHOB	ENSAOWP00000017554	ENSAOWP00000025735	Cell division cycle 42.	Ras homolog family member B.	0.844
CDC42	RHOF	ENSAOWP00000017554	ENSAOWP00000024507	Cell division cycle 42.	Ras homolog family member F, filopodia associated.	0.615
CDC42	RND1	ENSAOWP00000017554	ENSAOWP00000017103	Cell division cycle 42.	Rho family GTPase 1.	0.649
CDC42	RND3	ENSAOWP00000017554	ENSAOWP00000019089	Cell division cycle 42.	Rho family GTPase 3.	0.654
ENSAOWP00000012117	CDC42	ENSAOWP00000012117	ENSAOWP00000017554	annotation not available	Cell division cycle 42.	0.844
ENSAOWP00000012117	ENSAOWP00000015843	ENSAOWP00000012117	ENSAOWP00000015843	annotation not available	annotation not available	0.495
ENSAOWP00000012117	ENSAOWP00000022976	ENSAOWP00000012117	ENSAOWP00000022976	annotation not available	annotation not available	0.721
ENSAOWP00000012117	RAC1	ENSAOWP00000012117	ENSAOWP00000001093	annotation not available	Rac family small GTPase 1.	0.812
ENSAOWP00000012117	RAC3	ENSAOWP00000012117	ENSAOWP00000004096	annotation not available	Rac family small GTPase 3.	0.812
ENSAOWP00000012117	RHOF	ENSAOWP00000012117	ENSAOWP00000024507	annotation not available	Ras homolog family member F, filopodia associated.	0.486
ENSAOWP00000012117	RND3	ENSAOWP00000012117	ENSAOWP00000019089	annotation not available	Rho family GTPase 3.	0.552
ENSAOWP00000015843	CDC42	ENSAOWP00000015843	ENSAOWP00000017554	annotation not available	Cell division cycle 42.	0.615
ENSAOWP00000015843	ENSAOWP00000012117	ENSAOWP00000015843	ENSAOWP00000012117	annotation not available	annotation not available	0.495
ENSAOWP00000015843	ENSAOWP00000022976	ENSAOWP00000015843	ENSAOWP00000022976	annotation not available	annotation not available	0.623