STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000023905annotation not available (785 aa)    
Predicted Functional Partners:
ERCC6L
ERCC excision repair 6 like, spindle assembly checkpoint helicase.
   
   0.728
CHRD
Chordin.
    
 0.621
ERCC6L2
ERCC excision repair 6 like 2.
   
   0.591
NOG
Noggin.
    
 0.580
ACVRL1
Activin A receptor like type 1.
    
 0.553
ACVR1B
Activin A receptor type 1B.
    
 0.553
BMPR1B
Bone morphogenetic protein receptor type 1B.
    
 0.553
ACVR1C
Activin A receptor type 1C.
    
 0.553
ACVR1
Activin A receptor type 1.
    
 0.553
TGFBR1
Transforming growth factor beta receptor 1.
    
 0.553
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.