STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX8SRY-box transcription factor 8. (585 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.717
RUNX3
RUNX family transcription factor 3.
   
 0.692
RUNX2
RUNX family transcription factor 2.
   
 0.692
RUNX1
RUNX family transcription factor 1.
   
 0.692
WT1
WT1 transcription factor.
    
 0.631
ENSAOWP00000001011
annotation not available
    
 0.628
ENSAOWP00000006626
annotation not available
    
 0.591
ENSAOWP00000021127
annotation not available
    
 0.591
NR5A1
Nuclear receptor subfamily 5 group A member 1.
    
 0.579
NR5A2
Nuclear receptor subfamily 5 group A member 2.
    
 0.579
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.