STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFR3BEFR3 homolog B. (819 aa)    
Predicted Functional Partners:
PI4KA
Phosphatidylinositol 4-kinase alpha.
   
 
 0.758
TTC7B
Tetratricopeptide repeat domain 7B.
   
 
 0.743
TTC7A
Tetratricopeptide repeat domain 7A.
   
 
 0.743
RPS3A
Ribosomal protein S3A.
    
 
 0.484
FAM126A
Family with sequence similarity 126 member A.
      
 0.440
SEMA3E
Semaphorin 3E.
      
 0.424
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.