STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZD3PDZ domain containing 3. (504 aa)    
Predicted Functional Partners:
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
0.806
IFT57
Intraflagellar transport 57.
    
 0.679
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.663
IFT172
Intraflagellar transport 172.
    
 0.659
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.650
IFT80
Intraflagellar transport 80.
    
 0.650
IFT88
Intraflagellar transport 88.
    
 0.630
IFT81
Intraflagellar transport 81.
    
 0.624
IFT52
Intraflagellar transport 52.
    
 0.621
CFTR
CF transmembrane conductance regulator.
   
 0.618
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.