STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIG4FIG4 phosphoinositide 5-phosphatase. (842 aa)    
Predicted Functional Partners:
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
    
 0.997
VAC14
VAC14 component of PIKFYVE complex.
    
 0.992
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
   
 
 0.897
MTM1
Myotubularin 1.
     
 0.882
MTMR8
Myotubularin related protein 8.
   
 
 0.865
MTMR6
Myotubularin related protein 6.
   
 
 0.865
MTMR7
Myotubularin related protein 7.
   
 
 0.865
WIPI1
WD repeat domain, phosphoinositide interacting 1.
    
 0.856
WIPI2
WD repeat domain, phosphoinositide interacting 2.
    
 0.856
MTMR3
Myotubularin related protein 3.
     
 0.850
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.