STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH19Protocadherin 19. (1095 aa)    
Predicted Functional Partners:
LHFPL2
LHFPL tetraspan subfamily member 2.
    
  0.513
JUP
Junction plakoglobin.
    
 0.508
UCKL1
Uridine-cytidine kinase 1 like 1.
    
 0.505
UCK1
Uridine-cytidine kinase 1.
    
 0.505
UCK2
Uridine-cytidine kinase 2.
    
 0.505
CTNNB1
Catenin beta 1.
    
 0.505
ENSAOWP00000028580
annotation not available
    
 0.505
FAT2
FAT atypical cadherin 2.
    
 
0.499
FAT1
FAT atypical cadherin 1.
    
 
0.499
EP300
E1A binding protein p300.
    
 
 0.485
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.