rpsT protein (Desulfovibrio vulgaris Miyazaki)

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Score

rpsT

Ribosomal protein S20; Binds directly to 16S ribosomal RNA. (87 aa)

Predicted Functional Partners:

rpsU

0.996

rpsI

0.996

rpsR

0.995

rpsO

0.995

rpsP

0.995

rpsB

0.995

rpsJ

0.994

rpsF

0.994

rpsL

0.991

rplM

0.991

Your Current Organism:

Desulfovibrio vulgaris Miyazaki

NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rpsB	DvMF_0969	DvMF_2924	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S2; KEGG: dde:Dde_1133 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.995
rplM	rpsF	DvMF_0969	DvMF_1350	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.992
rplM	rpsI	DvMF_0969	DvMF_0970	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S9; KEGG: dde:Dde_2608 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsJ	DvMF_0969	DvMF_0078	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.993
rplM	rpsL	DvMF_0969	DvMF_0075	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.994
rplM	rpsO	DvMF_0969	DvMF_2509	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.996
rplM	rpsP	DvMF_0969	DvMF_2887	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S16; KEGG: dde:Dde_1099 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.992
rplM	rpsR	DvMF_0969	DvMF_1351	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.992
rplM	rpsT	DvMF_0969	DvMF_0292	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.991
rplM	rpsU	DvMF_0969	DvMF_0498	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S21; KEGG: dde:Dde_2056 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.982
rpsB	rplM	DvMF_2924	DvMF_0969	PFAM: ribosomal protein S2; KEGG: dde:Dde_1133 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.995
rpsB	rpsF	DvMF_2924	DvMF_1350	PFAM: ribosomal protein S2; KEGG: dde:Dde_1133 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.998
rpsB	rpsI	DvMF_2924	DvMF_0970	PFAM: ribosomal protein S2; KEGG: dde:Dde_1133 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	PFAM: ribosomal protein S9; KEGG: dde:Dde_2608 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.998
rpsB	rpsJ	DvMF_2924	DvMF_0078	PFAM: ribosomal protein S2; KEGG: dde:Dde_1133 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.998
rpsB	rpsL	DvMF_2924	DvMF_0075	PFAM: ribosomal protein S2; KEGG: dde:Dde_1133 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.998
rpsB	rpsO	DvMF_2924	DvMF_2509	PFAM: ribosomal protein S2; KEGG: dde:Dde_1133 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.997
rpsB	rpsP	DvMF_2924	DvMF_2887	PFAM: ribosomal protein S2; KEGG: dde:Dde_1133 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	PFAM: ribosomal protein S16; KEGG: dde:Dde_1099 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.997
rpsB	rpsR	DvMF_2924	DvMF_1351	PFAM: ribosomal protein S2; KEGG: dde:Dde_1133 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.998
rpsB	rpsT	DvMF_2924	DvMF_0292	PFAM: ribosomal protein S2; KEGG: dde:Dde_1133 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.995
rpsB	rpsU	DvMF_2924	DvMF_0498	PFAM: ribosomal protein S2; KEGG: dde:Dde_1133 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	PFAM: ribosomal protein S21; KEGG: dde:Dde_2056 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.993