STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DvMF_0407Septum formation initiator; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. (109 aa)    
Predicted Functional Partners:
DvMF_0953
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
 
 
 
 0.953
DvMF_0406
PFAM: Tetratricopeptide TPR_4; KEGG: dde:Dde_2071 response regulator receiver/SARP domain-containing protein.
 
     0.952
DvMF_0405
KEGG: dde:Dde_2070 hypothetical protein.
 
     0.886
DvMF_0408
KEGG: dde:Dde_2073 hypothetical protein.
  
    0.836
DvMF_3088
KEGG: dde:Dde_2441 hypothetical protein.
 
     0.782
DvMF_2563
PFAM: protein of unknown function DUF721; KEGG: dde:Dde_3136 hypothetical protein.
  
     0.770
DvMF_2822
KEGG: dde:Dde_0994 hypothetical protein.
  
     0.769
DvMF_3089
KEGG: dde:Dde_2440 putative lipoprotein.
  
     0.766
DvMF_0962
KEGG: dde:Dde_1035 hypothetical protein.
  
     0.762
DvMF_2558
KEGG: dde:Dde_1011 hypothetical protein.
  
     0.753
Your Current Organism:
Desulfovibrio vulgaris Miyazaki
NCBI taxonomy Id: 883
Other names: D. vulgaris str. 'Miyazaki F', Desulfovibrio vulgaris (strain Miyazaki), Desulfovibrio vulgaris str. 'Miyazaki F'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.